satijalab / seurat
git clone https://github.com/satijalab/seurat.git
v5.6.0 · 21d ago
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R toolkit for single-cell genomics analysis, covering clustering, integration, and spatial and multimodal data.
Why you might care
The standard R framework for single-cell RNA-seq and related assays, with tutorials and a long-running community. v5 adds spatial, multimodal, and scalable analysis while staying backwards-compatible with earlier workflows. Installs from CRAN on Mac, Linux, and Windows.
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Star history (as recorded here)
LanguageR
License—
Created2015-05-20 (11y ago)
Last push1d ago
Watchers73
OwnerOrganization
Seen on GitHub Trending
- 2026-10-24 — #8 daily in r
- 2026-10-24 — #7 monthly in r · +10 ★
- 2026-10-24 — #1 weekly in r · +3 ★
- 2026-10-23 — #2 daily in r · +1 ★
- 2026-10-23 — #7 monthly in r · +11 ★
- 2026-10-23 — #1 weekly in r · +3 ★
- 2026-10-22 — #2 daily in r
- 2026-10-22 — #8 monthly in r · +10 ★
- 2026-10-22 — #1 weekly in r · +3 ★
- 2026-10-21 — #2 daily in r
- 2026-10-21 — #9 monthly in r · +10 ★
- 2026-10-21 — #1 weekly in r · +3 ★
- 2026-10-20 — #2 daily in r
- 2026-10-20 — #9 monthly in r · +11 ★
- 2026-10-20 — #1 weekly in r · +3 ★
GitHub topics
Links
- GitHub: github.com/satijalab/seurat
- Homepage: http://www.satijalab.org/seurat
- Releases · Issues · Hacker News mentions
README
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Blurb generated by claude-haiku-5-5 1d ago. Star deltas marked ~ are extrapolated from partial history.