aipoch / open-science

The open-source AI research workbench for scientific research and agent workflows. Local-first, model-agnostic desktop app with extensible skills, MCP tools and connectors, Python/R execution and traceable artifacts for reproducible research on macOS, Windows and Linux.

brycewang-stanford / Auto-Empirical-Research-Skills

🔬 A curated collection of 23,000+ agent skills for empirical research across 8 social science disciplines. | 精选 23,000+ AI Agent 技能库，覆盖8大社会科学学科的实证研究。CoPaper.AI 20分钟完成一篇可复现的规范实证论文，并支持用户上传 Skills。-- Maintained by CoPaper.AI from Stanford REAP.

nextflow-io / nextflow

A workflow language for data-driven computational pipelines

Cloud-CV / EvalAI

:cloud: :rocket: :bar_chart: :chart_with_upwards_trend: Evaluating state of the art in AI

ai4s-research / open-science

Open Science Desktop — local-first, model-agnostic AI research workbench for macOS, Windows & Linux. Open-source Claude Science desktop alternative built on Tauri + MCP + agent skills.

pedrohcgs / claude-code-my-workflow

A ready-to-fork Claude Code template for academics using LaTeX/Beamer + R. Multi-agent review, quality gates, adversarial QA, and replication protocols.

InsightSoftwareConsortium / ITK

Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.

NVlabs / sionna

Sionna: An Open-Source Library for Research on Communication Systems

ddsjoberg / gtsummary

Presentation-Ready Data Summary and Analytic Result Tables

OpenSourceAP / CrossSection

Code to accompany our paper Chen and Zimmermann (2020), "Open source cross-sectional asset pricing"

xuzhougeng / wisp-science

Open-source, local-first desktop AI research workbench for scientific computing with Python/R, MCP bioinformatics tools, SSH/WSL/GPU runtimes, and OpenAI/Anthropic models.

limingrui679-design / high-stakes-analytics-decision-lab

A platform-neutral analytical Skill that profiles messy data, selects case-adaptive methods, and produces source-backed visual reports for high-stakes decisions.

Axelrod-Python / Axelrod

A research tool for the Iterated Prisoner's Dilemma

superwesleyhys-ux / factcircuit

FactCircuit: an auditable claim-and-evidence verification loop with immutable provenance, staged checks, bounded retrieval, and reproducible evaluation.

FloatingPragma / observer-patch-holography

Observer Patch Holography: finite observer consensus, machine-checked mathematics and reproducible models for reconstructing physical structure.

showyourwork / showyourwork

A workflow for reproducible and open scientific articles

nf-core / sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

heise3 / ExtremaRank

Native R and Python sample-deletion robustness for omics: candidate certificates, minimum deletion bounds, Bioconductor model refits and donor-level pseudobulk

xuzhougeng / ScientificFigureLibrary

Local-first MCP App for scientific figures. Import, review, and publish a global library on disk; reuse exact templates in Pi, DeepSeek Harness (dsh), Claude, Codex, Cursor, and Wisp.

heranliu / AlphaResearchOS

Agentic quant research workbench with CSV data inspection, local Codex and compatible APIs, predictive models, independent reviews, and reproducible backtests.

Vottivott / microduck-playground

Reproducible Microduck RL experiments, policies, simulation assets, and hardware add-ons

SuperJJ007 / papermachine

The AI analyst that shows its work. Runs Python and R on your own machine, and traces every chart back to the code behind it.

FareedKhan-dev / agentic-knowledge-graph

Knowledge-graph RAG built from structured metadata instead of LLM extraction. 929M edges, zero LLM calls, 83.2% on held-out PubMedQA. Case study: the full PubMed 2026 baseline.

pengjk0-dotcom / TennisProfile

Reproducibility materials for reliability-aware tennis groundstroke profiling from monocular 3D human recovery

Odyphus / MathModel-Copilot

面向国赛 CUMCM、美赛 MCM/ICM 的数学建模 AI 助手与 Agent Skill：审题、模型比较、Python 运行、结果核验、论文辅助和团队协作。Mathematical modeling AI copilot for CUMCM and MCM/ICM, with reproducible workflows and a local workbench.

yoheinakajima / glance-speedlab

A measurement-first lab for low-latency local camera inference with Glance.

maoyadongsh / siq-agent-security

Research artifacts for provenance-bound agent authorization, signed effect evidence, and reproducible security evaluation.

00200200 / repro-lens

Static reproducibility checks, experiment replay, and verification for ML pipelines.

cpt13-g / build-research-evidence

面向 AI/CS 科研的多 Skill 实验智能体：助力全自动科研实验，以 Claim 驱动、骨干实验优先、独立结果审计与 Evidence Freeze，把发散的模型能力收束为可追溯、可复现、可收敛的论文证据。

mohammadrezwankhan / datacenter-twin-lab

Explore data center power continuity, energy ledgers & infrastructure assumptions through reproducible synthetic models.

nodemaven / proxy-benchmark

Measurement harness for proxy providers, browser engines and scraping targets. Every claim carries the run it came from.

toocoldcc / bagholder50

冷西西韭菜50指数：可复现的 A 股散户拥挤度反向理论指数。

Nambekai / dangerous-person-detection-yolo11

YOLO11 research prototype for detecting people associated with potentially dangerous objects in public-area imagery, with thesis evidence, reproducibility notes, and responsible-use guidance.