biopython / biopython

Official git repository for Biopython (originally converted from CVS)

sokrypton / ColabFold

Making Protein folding accessible to all!

BradyAJohnston / MolecularNodes

Toolbox for molecular animations in Blender, powered by Geometry Nodes.

a-r-j / graphein

Protein Graph Library

BioPandas / biopandas

Working with molecular structures in pandas DataFrames

biojava / biojava

:book::microscope::coffee: BioJava is an open-source project dedicated to providing a Java library for processing biological data.

soedinglab / hh-suite

Remote protein homology detection suite.

GENTEL-lab / Fold2Reason

Official code for Fold2Reason: Enhancing general reasoning in language models through protein-structure post-training.

NVIDIA-BioNeMo / BioNeMo-Inference-Runtime

Easy, fast, and memory-efficient structure prediction inference