mahmoodlab / TRIDENT

Toolkit for large-scale whole-slide image processing.

qupath / qupath

QuPath - Open-source bioimage analysis for research

TissueImageAnalytics / tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.

mahmoodlab / CORAL

Spatial biology processing suite

FAST-Imaging / FAST

A framework for high-performance medical image processing, neural network inference and visualization

openslide / openslide

C library for reading virtual slide images

oncologylab / histopia

Histology Spatial Topology for Omics Profiling and Inter-section Alignment