Garinmckayl / anima
Anima: a Claude Code skill that turns a biology idea into an interactive, sourced, isometric figure. Dopamine receptors, stimulants, addiction circuits, semaglutide.
Garinmckayl / anima
psychopy / psychopy
For running psychology and neuroscience experiments
Frankweb33 / flybrain-robot-bridge
Experimental Drosophila-inspired camera-to-robot bridge. Working mock neural backend, optical flow, IMU feedback and UDP motor control. MaleCNS integration planned.
suanmiao / fly-self-driving
A fruit fly connectome (165k neurons, 25.6M synapses) trained to drive a simulated street from pixels. Code, patches, renderer, results.
mne-tools / mne-python
MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
jeshraghian / snntorch
Deep and online learning with spiking neural networks in Python
brainflow-dev / brainflow
BrainFlow is a library intended to obtain, parse and analyze EEG, EMG, ECG and other kinds of data from biosensors
braindecode / braindecode
Deep learning software to decode EEG, ECG or MEG signals
brian-team / brian2
Brian is a free, open source simulator for spiking neural networks.
rordenlab / dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
AdaptiveMotorControlLab / CEBRA
Learnable latent embeddings for joint behavioral and neural analysis - Official implementation of CEBRA
NeuroTechX / moabb
Mother of All BCI Benchmarks
fieldtrip / fieldtrip
The MATLAB toolbox for MEG, EEG and iEEG analysis
SpikeInterface / spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
cobanov / awesome-fly
A curated list of fruit fly connectome projects: MaleCNS, FlyWire, brain simulations, embodied models, games, and research tools.
brainglobe / brainrender
A Python package to visualise neuroanatomical data in atlas space
MouseLand / Kilosort
Fast spike sorting with drift correction
csinva / csinva.github.io
AI slides, paper notes, class notes, blog posts, and research overviews.
neuronsimulator / nrn
NEURON Simulator
SpikeCalls / FlyDrones
A fruit fly connectome as a drone pilot. Camera -> fly eyes -> spiking brain -> descending neurons -> drone. Live 3D demo in your browser.
Henryfud / nema
A 302 neuron network on the real C. elegans wiring diagram, with a steering layer for local language models.
evnsnclr / neurocraft-fly-public
NeuroCraft Fly by Evan Sinclair Smith: an interactive fruit-fly connectome model in Minecraft. Public project home and release roadmap.
cobanov / fly-connectome-template
Real fly anatomy and model-output starter. Custom license requires web UI and repository attribution.
lucaspedroleandro9811-glitch / Gene-Splice-Lab
Aim Genetics Lab Open Research Tools 2026: Build Precision Breeding Models
hasnaaatef / aim-lab-orchestrator
Aim Genetics Lab: CRISPR Gene Editing & Bioinformatics Tools 2026
dj-thank / fly-effect
Resource-aware open research on neural circuits, bodies, and simulated organisms. Starting with Drosophila.