scverse / scvi-tools

Deep probabilistic analysis of single-cell and spatial omics data

aristoteleo / dynamo-release

Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction and differential geometry analyses

windmirrorai / nanomirrors

State-of-the-art bio cell models for inference and training. Minimal, readable, and produciton-ready.