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K-Dense-AI / scientific-agent-skills

Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 250,000+ scientists worldwide. 177 ready-to-use validated skills plus 100+ scientific databases covering biology, chemistry, medicine, and drug discovery. Compatible with Cursor, Claude Code, Codex, Pi, Antigravity, and the open Agent Skills standard.

โ–ฒ 4.4k/7d โ˜… 53k Python ๐Ÿ”ฅ 1d ago
Dong-Fang-Bu-Bai / btr-dualrag

Source code for BTR-dualRAG: Bioinformatics Tool Recommendation With Dual Retrieval-Augmented Generation

โ–ฒ 89/7d โ˜… 89 Python 2d ago
THREATBYTES / Malware-Analysis-Report-Template

A standardised malware analysis report template with a JSON Schema and Markdown format mapped to MITRE ATT&CK. Validate, share and compare reports consistently. Part of ThreatBytes.

โ–ฒ 30/7d โ˜… 30 Python 7d ago
BerriAI / litellm

The fastest, litest AI Gateway. Rust core with Python SDK. Call 100+ LLM APIs in OpenAI (or native) format with cost tracking, guardrails, load balancing, and logging [Bedrock, Azure, OpenAI, Anthropic, OpenAI, VertexAI, vLLM, Nvidia NIM]

โ˜… 62k Python today
psf / black

The uncompromising Python code formatter

โ˜… 42k Python today
VectifyAI / PageIndex

๐Ÿ“‘ PageIndex: Document Index for Vectorless, Reasoning-based RAG

โ˜… 39k Python ๐Ÿ”ฅ today
soxoj / maigret

๐Ÿ•ต๏ธโ€โ™‚๏ธ Collect a dossier on a person by username from 6K websites

โ˜… 39k Python today
google / langextract

A Python library for extracting structured information from unstructured text using LLMs with precise source grounding and interactive visualization.

โ˜… 39k Python 3d ago
PDFMathTranslate / PDFMathTranslate

[EMNLP 2025 Demo] PDF scientific paper translation with preserved formats - ๅŸบไบŽ AI ๅฎŒๆ•ดไฟ็•™ๆŽ’็‰ˆ็š„ PDF ๆ–‡ๆกฃๅ…จๆ–‡ๅŒ่ฏญ็ฟป่ฏ‘๏ผŒๆ”ฏๆŒ Google/DeepL/Ollama/OpenAI ็ญ‰ๆœๅŠก๏ผŒๆไพ› CLI/GUI/MCP/Docker/Zotero

โ˜… 38k Python today
jax-ml / jax

Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more

โ˜… 36k Python today
onyx-dot-app / onyx

Open Source AI Platform - AI Chat with advanced features that works with every LLM

โ˜… 33k Python today
deepset-ai / haystack

Open-source AI orchestration framework for building context-engineered, production-ready LLM applications. Design modular pipelines and agent workflows with explicit control over retrieval, routing, memory, and generation. Built for scalable agents, RAG, multimodal applications, semantic search, and conversational systems.

โ˜… 27k Python today
kovidgoyal / calibre

The official source code repository for the calibre ebook manager

โ˜… 26k Python today
plotly / dash

Data Apps & Dashboards for Python. No JavaScript Required.

โ˜… 24k Python today
arc53 / DocsGPT

Private AI platform for agents, assistants and enterprise search. Built-in Agent Builder, Deep research, Document analysis, Multi-model support, and API connectivity for agents.

โ˜… 18k Python today
Comfy-Org / ComfyUI-Manager

ComfyUI-Manager is an extension designed to enhance the usability of ComfyUI. It offers management functions to install, remove, disable, and enable various custom nodes of ComfyUI. Furthermore, this extension provides a hub feature and convenience functions to access a wide range of information within ComfyUI.

โ˜… 17k Python 1d ago
Datalux / Osintgram

Osintgram is a OSINT tool on Instagram. It offers an interactive shell to perform analysis on Instagram account of any users by its nickname

โ˜… 15k Python today
s0md3v / Photon

Incredibly fast crawler designed for OSINT.

โ˜… 13k Python 3d ago
neuml / txtai

๐Ÿ’ก All-in-one AI framework for semantic search, LLM orchestration and language model workflows

โ˜… 13k Python today
data-privacy-stack / presidio

An open-source framework for detecting, redacting, masking, and anonymizing sensitive data (PII) across text, images, and structured data. Supports NLP, pattern matching, and customizable pipelines.

โ˜… 11k Python 1d ago
jsvine / pdfplumber

Plumb a PDF for detailed information about each char, rectangle, line, et cetera โ€”ย and easily extract text and tables.

โ˜… 11k Python 6d ago
CVHub520 / X-AnyLabeling

X-AnyLabeling: A lightweight, efficient, and unified cross-platform desktop application for annotating text, image, video, point cloud and multimodal data, combining versatile built-in tools with state-of-the-art AI models and flexible multi-format export.

โ˜… 11k Python today
ultralytics / yolov3

PyTorch implementation of YOLOv3, YOLOv3-SPP, and YOLOv3-tiny for real-time object detection with training, validation, inference, and multi-format export.

โ˜… 11k Python 3d ago
sqlfluff / sqlfluff

A modular SQL linter and auto-formatter with support for multiple dialects and templated code.

โ˜… 10.0k Python today
dr5hn / countries-states-cities-database

๐ŸŒ Discover our global repository of countries, states, and cities! ๐Ÿ™๏ธ Get comprehensive data in JSON, SQL, PSQL, SQLSERVER, MONGODB, SQLITE, XML, YAML, and CSV formats. Access ISO2, ISO3 codes, country code, capital, native language, timezones (for countries), and more. #countries #states #cities

โ˜… 9.9k Python today
aws / serverless-application-model

The AWS Serverless Application Model (AWS SAM) transform is a AWS CloudFormation macro that transforms SAM templates into CloudFormation templates.

โ˜… 9.6k Python today
bridgecrewio / checkov

Prevent cloud misconfigurations and find vulnerabilities during build-time in infrastructure as code, container images and open source packages with Checkov by Bridgecrew.

โ˜… 9.1k Python today
mage-ai / mage-ai

๐Ÿง™ Build, run, and manage data pipelines for integrating and transforming data.

โ˜… 8.8k Python 4d ago
The-Vibe-Company / megaparse

File Parser optimised for LLM Ingestion with no loss ๐Ÿง  Parse PDFs, Docx, PPTx in a format that is ideal for LLMs.

โ˜… 7.4k Python 5d ago
bup / bup

Very efficient backup system based on the git packfile format, providing fast incremental saves and global deduplication (among and within files, including virtual machine images). Please post problems or patches to the mailing list for discussion (see the end of the README below).

โ˜… 7.4k Python 7d ago
PyCQA / isort

A Python utility / library to sort imports.

โ˜… 7.0k Python 2d ago
wireservice / csvkit

A suite of utilities for converting to and working with CSV, the king of tabular file formats.

โ˜… 6.4k Python 29d ago
oomol-lab / pdf-craft

PDF craft can convert PDF files into various other formats. This project will focus on processing PDF files of scanned books.

โ˜… 6.4k Python today
lanmaster53 / recon-ng

Open Source Intelligence gathering tool aimed at reducing the time spent harvesting information from open sources.

โ˜… 6.0k Python 15d ago
OWASP / Nettacker

Automated Penetration Testing Framework - Open-Source Vulnerability Scanner - Vulnerability Management

โ˜… 5.7k Python 4d ago
biopython / biopython

Official git repository for Biopython (originally converted from CVS)

โ˜… 5.2k Python 1d ago
quantumlib / Cirq

Python framework for creating, editing, and running Noisy Intermediate-Scale Quantum (NISQ) circuits.

โ˜… 5.1k Python today
arxhr007 / Aliens_eye

AI powered OSINT engine to discover and map 840+ social media identities across the web

โ˜… 4.4k Python today
yifanfeng97 / Hyper-Extract

Hypergraph is more powerful. Transform unstructured text into structured knowledge with LLMs. Graphs, hypergraphs, and spatio-temporal extractions โ€” with one command.

โ˜… 4.2k Python 5d ago
urchade / GLiNER

Generalist and Lightweight Model for Named Entity Recognition (Extract any entity types from texts)

โ˜… 4.1k Python 15d ago
google / deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

โ˜… 3.8k Python 20d ago
AvdLee / SwiftUI-Agent-Skill

Add expert SwiftUI Best Practices guidance to your AI coding tool (Agent Skills open format).

โ˜… 3.7k Python 14d ago
Kometa-Team / Kometa

Python script to update metadata information for items in plex as well as automatically build collections and playlists. The Wiki Documentation is linked below.

โ˜… 3.5k Python today
superlinked / sie

Open-source inference server and production cluster for all the models your agent needs.

โ˜… 3.4k Python today
SQLMesh / sqlmesh

Scalable and efficient data transformation framework - backwards compatible with dbt.

โ˜… 3.3k Python today
Alfredredbird / tookie-osint

Tookie is a advanced OSINT information gathering tool that finds social media accounts based on inputs.

โ˜… 3.1k Python 1d ago
yuchenlin / rebiber

A simple tool to update bib entries with their official information (e.g., DBLP or the ACL anthology).

โ˜… 3.0k Python 1d ago
Dicklesworthstone / llm_aided_ocr

Enhances Tesseract OCR output using LLMs (local or API) for error correction, smart chunking, and markdown formatting of scanned PDFs

โ˜… 3.0k Python 6d ago
pytorch / audio

Data manipulation and transformation for audio signal processing, powered by PyTorch

โ˜… 3.0k Python today
snakemake / snakemake

This is the development home of the workflow management system Snakemake. For general information, see

โ˜… 2.9k Python 1d ago

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