97YearsOldProgrammer / flashalign

A fast aligner for long DNA and RNA reads.

OpenChemistry / avogadrolibs

Avogadro libraries provide 3D rendering, visualization, analysis and data processing useful in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

OpenGene / fastp

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

BenLangmead / bowtie2

A fast and sensitive gapped read aligner

torognes / vsearch

Versatile open-source tool for microbiome analysis